pore_c.utils module¶

class pore_c.utils.DaskExecEnv(n_workers: int = 1, processes: bool = True, threads_per_worker: int = 1, scheduler_port: int = 0, dashboard_port: Optional[int] = None)[source]¶

Bases: contextlib.AbstractContextManager

scatter(data)[source]¶

class pore_c.utils.DataFrameProgress(save_to=None, **kwds)[source]¶

Bases: object

close()[source]¶

save(path)[source]¶

update_data(df)[source]¶

update_progress_bar(num_rows)[source]¶

pore_c.utils.kmg_bases_to_int(value: str) → int[source]¶

pore_c.utils.mean_qscore(quals)[source]¶

pore_c.settings module